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CATCh – an ensemble classifier for chimera detection in 16S rRNA sequencing studies

CATCh – an ensemble classifier for chimera detection in 16S rRNA sequencing studies

Researchers at Albert-Ludwigs-University Freiburg have developed RNASEG, an algorithm for the prediction of transcriptional units based on d...

Researchers at Albert-Ludwigs-University Freiburg have developed RNASEG, an algorithm for the prediction of transcriptional units based on d...

Researchers at Xi’an Jiaotong-Liverpool University have previously developed an R/Bioconductor package ‘exomePeak’ for detecting RNA methyla...

Researchers at Xi’an Jiaotong-Liverpool University have previously developed an R/Bioconductor package ‘exomePeak’ for detecting RNA methyla...

Dr. Donald Sonnis a professional businessman and physician who has many different job titles and specialties.

Dr. Donald Sonnis a professional businessman and physician who has many different job titles and specialties.

IRcall and IRclassifier – two methods for flexible detection of intron retention events from RNA-Seq data - The emergence of next-generation RNA sequencing (RNA-Seq) provides tremendous opportunities for researchers to analyze alternative splicing on a genome-wide scale. However, accurate detection of intron retention (IR) events from RNA-Seq data has remained an unresolved challenge in next-generation sequencing (NGS) studies....

IRcall and IRclassifier – two methods for flexible detection of intron retention events from RNA-Seq data - The emergence of next-generation RNA sequencing (RNA-Seq) provides tremendous opportunities for researchers to analyze alternative splicing on a genome-wide scale. However, accurate detection of intron retention (IR) events from RNA-Seq data has remained an unresolved challenge in next-generation sequencing (NGS) studies....

In this study, researchers from the University of Michigan present a method to utilize GPMDB identification frequencies and RNA-Seq transcri...

In this study, researchers from the University of Michigan present a method to utilize GPMDB identification frequencies and RNA-Seq transcri...

Researchers at the University of North Carolina, Chapel Hill found that chimeric RNA-cDNA fragments can also be detected at 5′ end stem-loop...

Researchers at the University of North Carolina, Chapel Hill found that chimeric RNA-cDNA fragments can also be detected at 5′ end stem-loop...

PrimerView – forward and reverse primer design from multi-sequence datasets - High-throughput primer design is routinely performed in a wide number of molecular applications including genotyping specimens using traditional PCR techniques as well as assembly PCR, nested PCR, and primer walking experiments. Batch primer design is also required in validation experiments from RNA-seq transcriptome sequencing projects, as well as in generating probes for microarray experiments.  The growing…

PrimerView – forward and reverse primer design from multi-sequence datasets - High-throughput primer design is routinely performed in a wide number of molecular applications including genotyping specimens using traditional PCR techniques as well as assembly PCR, nested PCR, and primer walking experiments. Batch primer design is also required in validation experiments from RNA-seq transcriptome sequencing projects, as well as in generating probes for microarray experiments. The growing…

SnowyOwl is a new gene prediction pipeline that uses RNA-Seq data to train and provide hints for the generation of Hidden Markov Model (HMM)...

SnowyOwl is a new gene prediction pipeline that uses RNA-Seq data to train and provide hints for the generation of Hidden Markov Model (HMM)...

researchers at AgroParisTech propose to use the Pruned Dynamic Programming algorithm for Seq-experiment outputs. This requires the adaptatio...

researchers at AgroParisTech propose to use the Pruned Dynamic Programming algorithm for Seq-experiment outputs. This requires the adaptatio...

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